Intermediate8 min read

GST Invoicing & Compliance Guide

Learn how to configure GST slabs, generate GSTIN-compliant invoices, and prepare data for filing.

GST compliance is non-negotiable for registered pharmacies. PharmNex handles HSN codes, tax slab assignments, B2B/B2C invoice formats, and export-ready GSTR data — all automatically.

1

Understanding GST Slabs for Medicines

Pharmaceuticals in India span multiple GST slabs: 0% (life-saving drugs), 5% (most prescription medicines), 12% (some OTC products), and 18%/28% (certain medical devices and cosmetics). PharmNex lets you assign a slab per product.

Tip: When in doubt about an HSN code, use the "HSN Lookup" button on the product edit screen.

2

Configuring Tax Slabs in PharmNex

Navigate to Settings → Tax Configuration. Here you can create named tax groups (e.g. "GST 5%") that automatically split the rate into CGST + SGST for intra-state, or IGST for inter-state transactions. Assign each product to the correct group.

  1. 1Go to Settings → Tax Configuration
  2. 2Click "Add Tax Group" and set the rate and type
  3. 3Assign the group to products (individually or via bulk edit)
  4. 4PharmNex auto-applies state logic (CGST/SGST vs IGST)
3

Generating a B2B Invoice

For registered business customers, go to Billing → New Invoice and toggle "B2B". Enter the buyer's GSTIN — PharmNex validates it in real-time. The invoice will correctly display both party GSTINs, place of supply, and tax breakdowns.

Tip: PharmNex validates GSTINs against the GSTN database on save to catch typos before filing.

4

Credit Notes & Amendments

For returns or corrections, go to Billing → Credit Notes. Link the credit note to the original invoice — PharmNex maintains the traceability required for GST reconciliation. Amended invoices are automatically marked with the original invoice number.

  1. 1Go to Billing → Credit Notes → New Credit Note
  2. 2Search and link to the original invoice
  3. 3Enter return items and quantities
  4. 4Save — the credit note is linked in your GST reports
5

Exporting GSTR Data

Before filing, go to Reports → GST Reports. Select the period, choose GSTR-1 or GSTR-3B, and export as JSON (for direct upload to the GST portal) or Excel (for review). The export separates B2B, B2C, HSN summary, and nil-rated supplies.

Tip: Run the "Tax Reconciliation" report first to catch any mismatches before exporting to the portal.

Need hands-on help?

Our onboarding team is available to walk you through any part of PharmNex live.